FitHiChIP summary Report

Parameter list for the current execution of FitHiChIP: /home/springer/liang795/projects-in-nathan-lab/HiChip/2021-analysis/HiChip2021/Mo17-H3K4me3-Loop-HiChip-1000//Parameters.txt

List of CIS interactions within the specified distance thresholds (lower threshold: 20000 upper threshold: 2000000 ): /home/springer/liang795/projects-in-nathan-lab/HiChip/2021-analysis/HiChip2021/Mo17-H3K4me3-Loop-HiChip-1000//HiCPro_Matrix_BinSize2500/L_20000_U2000000/FitHiChIP.cis.interactions.DistThr.bed

Bin specific HiChIP coverage, coverage bias, and peak / non-peak boolean values: /home/springer/liang795/projects-in-nathan-lab/HiChip/2021-analysis/HiChip2021/Mo17-H3K4me3-Loop-HiChip-1000//NormFeatures/Coverage_Bias/FitHiChIP.coverage_Bias.bed

Statistics for peak to ALL (both peak and non-peak) loops

FitHiChIP background (0 means loose, 1 means stringent ) : 0

Statistics for peak to ALL (both peak and non-peak) loops

FitHiChIP background (0 means loose, 1 means stringent ) : 1