Summary Statistics

Plots

Histogram of read lengths

Histogram of read lengths after log transformation

Weighted Histogram of read lengths

Weighted Histogram of read lengths after log transformation

Dynamic histogram of Read length

Yield by length

Read lengths vs Average read quality plot using dots

Read lengths vs Average read quality plot using a kernel density estimation

NanoPlot report

Summary statistics

feature
General summary
Mean read length 13,061.1
Mean read quality 9.9
Median read length 4,680.0
Median read quality 9.7
Number of reads 46,117.0
Read length N50 24,769.0
Total bases 602,339,308.0
Number, percentage and megabases of reads above quality cutoffs
>Q5 46117 (100.0%) 602.3Mb
>Q7 46117 (100.0%) 602.3Mb
>Q10 19728 (42.8%) 193.0Mb
>Q12 5086 (11.0%) 21.0Mb
>Q15 42 (0.1%) 0.1Mb
Top 5 highest mean basecall quality scores and their read lengths
1 17.3 (297)
2 16.2 (3112)
3 16.2 (988)
4 16.1 (902)
5 16.0 (988)
Top 5 longest reads and their mean basecall quality score
1 245567 (7.0)
2 188574 (9.9)
3 187313 (8.1)
4 186483 (10.2)
5 176459 (10.4)

Plots

Histogram of read lengths





Histogram of read lengths after log transformation





Weighted Histogram of read lengths





Weighted Histogram of read lengths after log transformation





Dynamic histogram of Read length